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张亚利, 宋垚, 奉树成. SSR分子标记在山茶属观赏资源遗传多样性研究中的应用[J]. 植物科学学报, 2016, 34(5): 755-764. DOI: 10.11913/PSJ.2095-0837.2016.50755
引用本文: 张亚利, 宋垚, 奉树成. SSR分子标记在山茶属观赏资源遗传多样性研究中的应用[J]. 植物科学学报, 2016, 34(5): 755-764. DOI: 10.11913/PSJ.2095-0837.2016.50755
ZHANG Ya-Li, SONG Yao, FENG Shu-Cheng. Application of SSR for the Analysis of Genetic Diversity in Camellia[J]. Plant Science Journal, 2016, 34(5): 755-764. DOI: 10.11913/PSJ.2095-0837.2016.50755
Citation: ZHANG Ya-Li, SONG Yao, FENG Shu-Cheng. Application of SSR for the Analysis of Genetic Diversity in Camellia[J]. Plant Science Journal, 2016, 34(5): 755-764. DOI: 10.11913/PSJ.2095-0837.2016.50755

SSR分子标记在山茶属观赏资源遗传多样性研究中的应用

Application of SSR for the Analysis of Genetic Diversity in Camellia

  • 摘要: 采用微卫星(SSR)分子标记的方法,利用20对SSR引物对33份山茶属资源(含种和品种)的DNA样品进行了PCR扩增,从中筛选出10对扩增效果较好的SSR引物,并对33份资源进行了遗传多样性分析。结果显示:10对引物在33个植物材料中共检测出123个等位基因,每个SSR位点的等位基因数为3~22个,SSR2引物检测到的等位基因数量最多,达22个,平均每对引物含有12.3个等位基因,平均多态性信息量为0.74,变化范围为0.06~0.96。利用遗传距离矩阵按UPGMA方法进行聚类,结果表明33份植物材料可分为9个分支,很好的区分了品种间的亲缘关系,可为杂交育种的组合选择提供理论基础。不同花型的山茶属植物在10个微卫星位点上共发现42个特异等位基因,可能与不同的花型性状有关。

     

    Abstract: In this paper, SSR molecular marker and composite sampling approaches were employed to perform PCR amplification for 33 DNA samples of Camellia. 10 SSR primer pairs that produced good amplification patterns from a total of 20 SSR primer pairs were screened and the genetic diversities and correlations among the 33 Camellia varieties were analyzed. A total of 123 alleles were detected in the 33 Camellia varieties from the 10 screened primer pairs. The number of alleles at each SSR locus ranged from 3 to 22, with a mean of 12.3; the average PIC was 0.76, ranging from 0.06 to 0.96. The highest number of alleles detected by primer SSR2 was 22. By employing the genetic similarity matrix, in combination with UPGMA cluster analysis, the 33 Camellia could be classified into 9 groups, which showed good phylogenetic relationships and provided a theoretical foundation for enhancing breeding efficiency. In addition, 42 special alleles on 10 microsatellite loci from different flower types of Camellia were detected, which might be related to traits of Camellia flower type.

     

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